2PVU	Transport Protein	date	May 10, 2007
title	Crystal Structures Of The Arginine-, Lysine-, Histidine-Bind Protein Artj From The Thermophilic Bacterium Geobacillus Stearothermophilus
authors	A.Vahedi-Faridi, F.Scheffel, V.Eckey, W.Saenger, E.Schneider
compound		source
Molecule: Artj Chain: A Engineered: Yes Mutation: Yes		Organism_scientific: Geobacillus Stearothermophilus Organism_taxid: 1422 Strain: Geobacillus Stearothermophilus Dsmz 13240 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta 2 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
symmetry	Space Group: C 2 2 21	R_factor 0.174 R_Free 0.224
crystal cell	length a length b length c angle alpha angle beta angle gamma 68.268 73.887 102.681 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.79 Å
ligand	LYS, SO4	enzyme
Gene Ontology	Chain Function Process Component A ligand-gated ion channel act...
Primary reference	Crystal structures and mutational analysis of the arginine-, lysine-, histidine-binding protein ArtJ from Geobacillus stearothermophilus. Implications for interactions of ArtJ with its cognate ATP-binding cassette transporter, Art(MP)2., Vahedi-Faridi A, Eckey V, Scheffel F, Alings C, Landmesser H, Schneider E, Saenger W, J Mol Biol. 2008 Jan 11;375(2):448-59. Epub 2007 Oct 23. PMID:18022195

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk] Biological Unit Coordinates (2pvu.pdb1.gz) 41 Kb LPC: Ligand-Protein Contacts for 2PVU CSU: Contacts of Structural Units for 2PVU Likely Quarternary Molecular Structure file(s) for 2PVU Structure Factors (182 Kb) Retrieve 2PVU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2PVU from S2C, [Save to disk] Re-refined 2pvu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2PVU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2PVU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2PVU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2pvu_A] [2pvu] SWISS-PROT database: [D0VWX8] [Q5KU98] Domain organization of [D0VWX8_BACST] [Q5KU98_GEOKA] by SWISSPFAM Domain found in 2PVU: [PBPb ] by SMART

Other resources with information on 2PVU

Community annotation for 2PVU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---