2PX6 Transferase date May 14, 2007
title Crystal Structure Of The Thioesterase Domain Of Human Fatty Acid Synthase Inhibited By Orlistat
authors C.W.Pemble Iv, L.C.Johnson, S.J.Kridel, W.T.Lowther
compound source
Molecule: Thioesterase Domain
Chain: A, B
Fragment: Residues 2200-2511
Ec: 2.3.1.85
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fas
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: C41(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 1 21 1
R_factor 0.225 R_Free 0.273
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.860 94.320 69.720 90.00 95.82 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand DH9, DTT enzyme Transferase E.C.2.3.1.85 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of the thioesterase domain of human fatty acid synthase inhibited by Orlistat., Pemble CW 4th, Johnson LC, Kridel SJ, Lowther WT, Nat Struct Mol Biol. 2007 Aug;14(8):704-9. Epub 2007 Jul 8. PMID:17618296
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (2px6.pdb1.gz) 42 Kb
  • Biological Unit Coordinates (2px6.pdb2.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 2PX6
  • CSU: Contacts of Structural Units for 2PX6
  • Likely Quarternary Molecular Structure file(s) for 2PX6
  • Structure Factors (348 Kb)
  • Retrieve 2PX6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PX6 from S2C, [Save to disk]
  • Re-refined 2px6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2PX6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2PX6
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2PX6, from MSDmotif at EBI
  • Fold representative 2px6 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2px6_A] [2px6] [2px6_B]
  • SWISS-PROT database: [P49327]
  • Domain organization of [FAS_HUMAN] by SWISSPFAM
  • Other resources with information on 2PX6
  • Community annotation for 2PX6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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