OCA Atlas for 2PYE

2PYE

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

7PE, GOL, PGE, SO4

enzyme

Gene
Ontology

Chain	Function	Process	Component
B		cellular response to iron io...

Primary reference

Crystal structures of high affinity human T-cell receptors bound to peptide major histocompatibility complex reveal native diagonal binding geometry., Sami M, Rizkallah PJ, Dunn S, Molloy P, Moysey R, Vuidepot A, Baston E, Todorov P, Li Y, Gao F, Boulter JM, Jakobsen BK, Protein Eng Des Sel. 2007 Aug;20(8):397-403. Epub 2007 Jul 20. PMID:17644531

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (151 Kb) [Save to disk]

Biological Unit Coordinates (2pye.pdb1.gz) 143 Kb

LPC: Ligand-Protein Contacts for 2PYE

CSU: Contacts of Structural Units for 2PYE

Likely Quarternary Molecular Structure file(s) for 2PYE

Structure Factors (310 Kb)

Retrieve 2PYE in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2PYE from S2C, [Save to disk]

Re-refined 2pye structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2PYE in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2pye] [2pye_A] [2pye_B] [2pye_C] [2pye_D] [2pye_E]

SWISS-PROT database: [P01892] [P61769] [P78358] [P01848] [P01850]

Domains found in 2PYE: [IG_like] [IGc1] [IGv ] by SMART

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