2Q0N Transferase date May 22, 2007
title Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex Consensus Peptide
authors P.Filippakopoulos, J.Eswaran, A.Turnbull, E.Papagrigoriou, A.W.P Delft, M.Sundstrom, A.Edwards, C.H.Arrowsmith, J.Weigelt, S.Knap Structural Genomics Consortium (Sgc)
compound source
Molecule: Serinethreonine-Protein Kinase Pak 4
Chain: A
Fragment: Kinase Domain, Residues 291-591
Synonym: P21-Activated Kinase 4, Pak-4
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pak4, Kiaa1142
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta-R3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4

Molecule: Synthetic Peptide
Chain: B
Engineered: Yes

Synthetic: Yes
Other_details: Synthetic Peptide
symmetry Space Group: P 43 21 2
R_factor 0.182 R_Free 0.228
length a length b length c angle alpha angle beta angle gamma
145.678 145.678 39.577 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.75 Å
ligand EDO, SEP, SO4 enzyme Transferase E.C. BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (2q0n.pdb1.gz) 56 Kb
  • LPC: Ligand-Protein Contacts for 2Q0N
  • CSU: Contacts of Structural Units for 2Q0N
  • Likely Quarternary Molecular Structure file(s) for 2Q0N
  • Structure Factors (661 Kb)
  • Retrieve 2Q0N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Q0N from S2C, [Save to disk]
  • Re-refined 2q0n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Q0N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2Q0N
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2Q0N, from MSDmotif at EBI
  • Fold representative 2q0n from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2q0n] [2q0n_B] [2q0n_A]
  • SWISS-PROT database: [O96013]
  • Domain organization of [PAK4_HUMAN] by SWISSPFAM
  • Domain found in 2Q0N: [S_TKc ] by SMART
  • Other resources with information on 2Q0N
  • Community annotation for 2Q0N at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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