2Q9S Lipid Binding Protein date Jun 13, 2007
title Linoleic Acid Bound To Fatty Acid Binding Protein 4
authors R.E.Gillilan, S.D.Ayers, N.Noy
compound source
Molecule: Fatty Acid-Binding Protein
Chain: A
Synonym: Afabp, Adipocyte Lipid-Binding Protein, Albp, A-Fa Adipocyte Protein, Myelin P2 Protein Homolog, 3t3-L1 Lipid- Protein, 422 Protein, P15, Fabp4;
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Fabp4
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: C 2 2 21
R_factor 0.226 R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
77.560 96.267 49.893 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand EIC, SO4 BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural Basis for Activation of Fatty Acid-binding Protein 4., Gillilan RE, Ayers SD, Noy N, J Mol Biol. 2007 Oct 5;372(5):1246-60. Epub 2007 Aug 2. PMID:17761196
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (27 Kb) [Save to disk]
  • Biological Unit Coordinates (2q9s.pdb1.gz) 42 Kb
  • Biological Unit Coordinates (2q9s.pdb2.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 2Q9S
  • CSU: Contacts of Structural Units for 2Q9S
  • Likely Quarternary Molecular Structure file(s) for 2Q9S
  • Structure Factors (60 Kb)
  • Retrieve 2Q9S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Q9S from S2C, [Save to disk]
  • Re-refined 2q9s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Q9S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2Q9S
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2Q9S, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2q9s] [2q9s_A]
  • SWISS-PROT database: [P04117]
  • Domain organization of [FABP4_MOUSE] by SWISSPFAM
  • Other resources with information on 2Q9S
  • Community annotation for 2Q9S at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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