2QHR	Immune System Viral Protein	date	Jul 02, 2007
title	Crystal Structure Of The 13f6-1-2 Fab Fragment Bound To Its Virus Glycoprotein Peptide Epitope.
authors	J.E.Lee, A.Kuehne, D.M.Abelson, M.L.Fusco, M.K.Hart, E.O.Saphire
compound		source
Molecule: 13f6-1-2 Fab Fragment Heavy Chain Chain: H		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Other_details: Hybridoma
Molecule: 13f6-1-2 Fab Fragment V Lambda X Light Chain Chain: L		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Other_details: Hybridoma
Molecule: Envelope Glycoprotein Peptide Chain: P Fragment: Envelope Glycoprotein Peptide, Residues 404-414 Engineered: Yes		Synthetic: Yes Other_details: The Sequence Of The Peptide Occurs In Ebolav (Zaire Subtype) Envelope Glycoprotein As Residues 404-414.
symmetry	Space Group: P 21 21 21	R_factor 0.203 R_Free 0.245
crystal cell	length a length b length c angle alpha angle beta angle gamma 68.240 70.300 142.120 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
Gene Ontology	Chain Function Process Component L
Primary reference	Complex of a protective antibody with its Ebola virus GP peptide epitope: unusual features of a V lambda x light chain., Lee JE, Kuehne A, Abelson DM, Fusco ML, Hart MK, Saphire EO, J Mol Biol. 2008 Jan 4;375(1):202-16. Epub 2007 Oct 16. PMID:18005986

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk] Biological Unit Coordinates (2qhr.pdb1.gz) 144 Kb CSU: Contacts of Structural Units for 2QHR Likely Quarternary Molecular Structure file(s) for 2QHR Structure Factors (340 Kb) Retrieve 2QHR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2QHR from S2C, [Save to disk] Re-refined 2qhr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2QHR in 3D

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Visual 3D analysis of 2QHR

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2QHR, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2qhr_P] [2qhr_H] [2qhr_L] [2qhr] SWISS-PROT database: [P01844] [P87671] Domain organization of [LAC2_MOUSE] [VGP_EBOEC] by SWISSPFAM Domains found in 2QHR: [IG_like] [IGv ] by SMART

Other resources with information on 2QHR

Community annotation for 2QHR at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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