OCA Atlas for 2QJI

2QJI

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

13P, GOL

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, I, T, M, K, F, H, L, D, Q, G, N, J, E, O, C, S, P, R, A

Primary reference

Structure of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid synthase, a catalyst in the archaeal pathway for the biosynthesis of aromatic amino acids., Morar M, White RH, Ealick SE, Biochemistry. 2007 Sep 18;46(37):10562-71. Epub 2007 Aug 22. PMID:17713928

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (826 Kb) [Save to disk]

Biological Unit Coordinates (2qji.pdb1.gz) 416 Kb

Biological Unit Coordinates (2qji.pdb2.gz) 414 Kb

LPC: Ligand-Protein Contacts for 2QJI

CSU: Contacts of Structural Units for 2QJI

Likely Quarternary Molecular Structure file(s) for 2QJI

Structure Factors (1104 Kb)

Retrieve 2QJI in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2QJI from S2C, [Save to disk]

Re-refined 2qji structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2QJI in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2qji] [2qji_A] [2qji_B] [2qji_C] [2qji_D] [2qji_E] [2qji_F] [2qji_G] [2qji_H] [2qji_I] [2qji_J] [2qji_K] [2qji_L] [2qji_M] [2qji_N] [2qji_O] [2qji_P] [2qji_Q] [2qji_R] [2qji_S] [2qji_T]

SWISS-PROT database: [Q57843]

Domain found in 2QJI: [DeoC ] by SMART

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