2QP6 Lyase date Jul 23, 2007
title The Crystal Structure Of The Complex Of Hcaii With A Bioredu Antitumor Derivative
authors K.D'Ambrosio, G.De Simone
compound source
Molecule: Carbonic Anhydrase 2
Chain: A
Synonym: Carbonic Anhydrase II, Carbonate Dehydratase II, C Carbonic Anhydrase C;
Ec: 4.2.1.1
Organism_scientific: Homo Sapiens
Organism_common: Human
Other_details: Erythrocytes
symmetry Space Group: P 1 21 1
R_factor 0.192 R_Free 0.207
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.069 41.238 71.829 90.00 104.20 90.00
method X-Ray Diffractionresolution 1.45 Å
ligand CL, HG, MB1, MBO, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCarbonic Anhydrase Inhibitors: Bioreductive Nitro-Containing Sulfonamides with Selectivity for Targeting the Tumor Associated Isoforms IX and XII., D'Ambrosio K, Vitale RM, Dogne JM, Masereel B, Innocenti A, Scozzafava A, De Simone G, Supuran CT, J Med Chem. 2008 May 16;. PMID:18481843
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (2qp6.pdb1.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 2QP6
  • CSU: Contacts of Structural Units for 2QP6
  • Likely Quarternary Molecular Structure file(s) for 2QP6
  • Structure Factors (318 Kb)
  • Retrieve 2QP6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QP6 from S2C, [Save to disk]
  • Re-refined 2qp6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2QP6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2QP6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2QP6, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qp6] [2qp6_A]
  • SWISS-PROT database: [P00918]
  • Domain organization of [CAH2_HUMAN] by SWISSPFAM
  • Domain found in 2QP6: [Carb_anhydrase ] by SMART
  • Other resources with information on 2QP6
  • Community annotation for 2QP6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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