2QPX Crystal structure of putative metal-dependent hydrolase (YP_805737.1) from Lactobacillus casei ATCC 334 at 1.40 A resolution date
authors JCSG, Joint.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.162
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.40
ligand EDO, KCX, MSE, ZN enzyme
note 2QPX is a representative structure
Gene LSEI ; YP
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (155 Kb) [Save to disk]
  • Biological Unit Coordinates (2qpx.pdb1.gz) 437 Kb
  • LPC: Ligand-Protein Contacts for 2QPX
  • CSU: Contacts of Structural Units for 2QPX
  • Likely Quarternary Molecular Structure file(s) for 2QPX
  • Structure Factors (42200 Kb)
  • Retrieve 2QPX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QPX from S2C, [Save to disk]
  • Re-refined 2qpx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2QPX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2QPX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2QPX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qpx] [2qpx_A]
  • SWISS-PROT database: [Q03BX7]
  • Domain organization of [Q03BX7_LACC3] by SWISSPFAM
  • Other resources with information on 2QPX
  • Community annotation for 2QPX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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