2QQ2 Hydrolase date Jul 26, 2007
title Crystal Structure Of C-Terminal Domain Of Human Acyl-Coa Thi
authors R.Busam, L.Lehtio, C.H.Arrowsmith, H.Berglund, R.Collins, L.G.Dah M.D.Herman, A.Edwards, S.Flodin, A.Flores, S.Graslund, M.Hammars B.M.Hallberg, L.Holmberg-Schiavone, I.Johansson, A.Kallas, T.Ka T.Kotenyova, M.Moche, P.Nordlund, T.Nyman, J.Sagemark, P.Stenmar M.Sundstrom, A.G.Thorsell, L.Tresaugues, S.Van Den Berg, J.Weig M.Welin, C.Persson, Structural Genomics Consortium (Sgc)
compound source
Molecule: Cytosolic Acyl Coenzyme A Thioester Hydrolase
Chain: A, B, C, D, E, F, G, H, I, J, K, L
Fragment: C-Terminal Domain: Residues 209-378
Synonym: Long Chain Acyl-Coa Thioester Hydrolase, Cte-II, C Brain Acyl-Coa Hydrolase, Acyl-Coa Thioesterase 7;
Ec: 3.1.2.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Acot7, Bach
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic-Bsa4
symmetry Space Group: P 1
R_factor 0.216 R_Free 0.239
crystal
cell
length a length b length c angle alpha angle beta angle gamma
80.950 81.600 105.100 79.61 89.70 74.12
method X-Ray Diffractionresolution 2.80 Å
ligand
enzyme Hydrolase E.C.3.1.2.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (294 Kb) [Save to disk]
  • Biological Unit Coordinates (2qq2.pdb1.gz) 144 Kb
  • Biological Unit Coordinates (2qq2.pdb2.gz) 141 Kb
  • CSU: Contacts of Structural Units for 2QQ2
  • Likely Quarternary Molecular Structure file(s) for 2QQ2
  • Structure Factors (915 Kb)
  • Retrieve 2QQ2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QQ2 from S2C, [Save to disk]
  • Re-refined 2qq2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2QQ2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2QQ2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2QQ2, from MSDmotif at EBI
  • Fold representative 2qq2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qq2_H] [2qq2] [2qq2_F] [2qq2_L] [2qq2_B] [2qq2_J] [2qq2_K] [2qq2_E] [2qq2_G] [2qq2_C] [2qq2_D] [2qq2_I] [2qq2_A]
  • SWISS-PROT database: [O00154]
  • Domain organization of [BACH_HUMAN] by SWISSPFAM
  • Other resources with information on 2QQ2
  • Community annotation for 2QQ2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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