2R0Q Recombination Dna date Aug 21, 2007
title Crystal Structure Of A Serine Recombinase- Dna Regulatory Co
authors P.A.Rice, K.W.Mouw
compound source
Molecule: 31-Mer
Chain: A, G
Engineered: Yes
Other_details: Site II Dna Strand 1
Synthetic: Yes

Molecule: 31-Mer
Chain: B, H
Engineered: Yes
Other_details: Site II Dna Strand 2

Synthetic: Yes

Molecule: Putative Transposon Tn552 Dna-Invertase Bin3
Chain: C, D, E, F
Engineered: Yes

Organism_scientific: Staphylococcus Aureus
Organism_taxid: 1280
Strain: Nctc 9789
Gene: Bin3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta (De3) Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Psa1122
symmetry Space Group: P 65
R_factor 0.267 R_Free 0.291
crystal
cell
length a length b length c angle alpha angle beta angle gamma
132.500 132.500 315.100 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.20 Å
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, D, C, E


Primary referenceArchitecture of a serine recombinase-DNA regulatory complex., Mouw KW, Rowland SJ, Gajjar MM, Boocock MR, Stark WM, Rice PA, Mol Cell. 2008 Apr 25;30(2):145-55. PMID:18439894
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (178 Kb) [Save to disk]
  • Biological Unit Coordinates (2r0q.pdb1.gz) 172 Kb
  • LPC: Ligand-Protein Contacts for 2R0Q
  • CSU: Contacts of Structural Units for 2R0Q
  • Likely Quarternary Molecular Structure file(s) for 2R0Q
  • Structure Factors (1936 Kb)
  • Retrieve 2R0Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2R0Q from S2C, [Save to disk]
  • Re-refined 2r0q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2R0Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2R0Q
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2R0Q, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2r0q_C] [2r0q] [2r0q_F] [2r0q_D] [2r0q_A] [2r0q_E] [2r0q_H] [2r0q_B] [2r0q_G]
  • SWISS-PROT database: [P20384]
  • Domain organization of [BIN3_STAAU] by SWISSPFAM
  • Domain found in 2R0Q: [Resolvase ] by SMART
  • Other resources with information on 2R0Q
  • Community annotation for 2R0Q at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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