2R5G Transport Protein date Sep 03, 2007
title Structure Of Human Clic2, Crystal Form B
authors M.A.Gorman, G.Hansen, B.A.Cromer, M.W.Parker
compound source
Molecule: Chloride Intracellular Channel Protein 2
Chain: A
Synonym: Xap121
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Clic2
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Inhouse Vector
symmetry Space Group: P 1 21 1
R_factor 0.184 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
35.973 66.940 44.071 90.00 99.86 90.00
method X-Ray Diffractionresolution 1.86 Å
Gene
Ontology
ChainFunctionProcessComponent
A
  • glutathione peroxidase activ...
  • negative regulation of ryano...

  • Primary referenceStructure of the Janus Protein Human CLIC2., Cromer BA, Gorman MA, Hansen G, Adams JJ, Coggan M, Littler DR, Brown LJ, Mazzanti M, Breit SN, Curmi PM, Dulhunty AF, Board PG, Parker MW, J Mol Biol. 2007 Nov 30;374(3):719-31. Epub 2007 Sep 20. PMID:17945253
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (2r5g.pdb1.gz) 42 Kb
  • CSU: Contacts of Structural Units for 2R5G
  • Structure Factors (222 Kb)
  • Retrieve 2R5G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2R5G from S2C, [Save to disk]
  • Re-refined 2r5g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2R5G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2R5G
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2R5G, from MSDmotif at EBI
  • Fold representative 2r5g from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2r5g] [2r5g_A]
  • SWISS-PROT database: [O15247]
  • Belongs to the intracellular chloride channel (clic) family according to TCDB.
  • Domain organization of [CLIC2_HUMAN] by SWISSPFAM
  • Other resources with information on 2R5G
  • Community annotation for 2R5G at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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