2R5T Transferase date Sep 04, 2007
title Crystal Structure Of Inactive Serum And Glucocorticoid- Regu Kinase 1 In Complex With Amp-Pnp
authors B.Zhao, R.Lehr, A.M.Smallwood, T.F.Ho, K.Maley, T.Randall, M.S.Hea K.K.Koretke, C.G.Schnackenberg
compound source
Molecule: Serinethreonine-Protein Kinase Sgk1
Chain: A
Synonym: Serumglucocorticoid-Regulated Kinase 1
Ec: 2.7.11.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Gene: Sgk, Sgk1
Expression_system: Baculovirus
Expression_system_vector_type: Gatway Gst Tagged Expression
symmetry Space Group: P 65 2 2
R_factor 0.191 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
97.873 97.873 147.848 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.90 Å
ligand ANP, MG, SO4 enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the kinase domain of serum and glucocorticoid-regulated kinase 1 in complex with AMP PNP., Zhao B, Lehr R, Smallwood AM, Ho TF, Maley K, Randall T, Head MS, Koretke KK, Schnackenberg CG, Protein Sci. 2007 Dec;16(12):2761-9. Epub 2007 Oct 26. PMID:17965184
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]
  • Biological Unit Coordinates (2r5t.pdb1.gz) 102 Kb
  • Biological Unit Coordinates (2r5t.pdb2.gz) 203 Kb
  • Biological Unit Coordinates (2r5t.pdb3.gz) 203 Kb
  • LPC: Ligand-Protein Contacts for 2R5T
  • CSU: Contacts of Structural Units for 2R5T
  • Likely Quarternary Molecular Structure file(s) for 2R5T
  • Structure Factors (298 Kb)
  • Retrieve 2R5T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2R5T from S2C, [Save to disk]
  • Re-refined 2r5t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2R5T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2R5T
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2R5T, from MSDmotif at EBI
  • Fold representative 2r5t from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2r5t_A] [2r5t]
  • SWISS-PROT database: [O00141]
  • Domain organization of [SGK1_HUMAN] by SWISSPFAM
  • Domains found in 2R5T: [S_TK_X] [S_TKc ] by SMART
  • Other resources with information on 2R5T
  • Community annotation for 2R5T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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