2RAW Cell Cycle date Sep 17, 2007
title Crystal Structure Of The Borealin-Survivin Complex
authors S.G.Hymowitz
compound source
Molecule: Baculoviral Iap Repeat-Containing Protein 5
Chain: A
Synonym: Apoptosis Inhibitor Survivin, Apoptosis Inhibitor
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Birc5, Api4, Iap4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21-De3 Plyss Rosetta 2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-28

Molecule: Borealin
Chain: B
Fragment: N-Terminal Region (Residues 20-78)
Synonym: Dasra-B, Hdasra-B, Cell Division Cycle-Associated Pluripotent Embryonic Stem Cell-Related Gene 3 Protein;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cdca8, Pescrg3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21-De3 Plyss Rosetta 2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-21
symmetry Space Group: C 1 2 1
R_factor 0.248 R_Free 0.298
crystal
cell
length a length b length c angle alpha angle beta angle gamma
113.700 51.681 46.289 90.00 98.82 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe mitotic regulator survivin binds as a monomer to its functional interactor Borealin., Bourhis E, Hymowitz SG, Cochran AG, J Biol Chem. 2007 Sep 19;. PMID:17881355
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (2raw.pdb1.gz) 32 Kb
  • LPC: Ligand-Protein Contacts for 2RAW
  • CSU: Contacts of Structural Units for 2RAW
  • Likely Quarternary Molecular Structure file(s) for 2RAW
  • Structure Factors (135 Kb)
  • Retrieve 2RAW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RAW from S2C, [Save to disk]
  • Re-refined 2raw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2RAW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2RAW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RAW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2raw] [2raw_A] [2raw_B]
  • SWISS-PROT database: [O15392] [Q53HL2]
  • Domain organization of [BIRC5_HUMAN] [BOREA_HUMAN] by SWISSPFAM
  • Domain found in 2RAW: [BIR ] by SMART
  • Other resources with information on 2RAW
  • Community annotation for 2RAW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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