2RCJ Immune System date Sep 20, 2007
title Solution Structure Of Human Immunoglobulin M
authors S.J.Perkins, A.S.Nealis, B.J.Sutton, A.Feinstein
compound source
Molecule: Iga1 Light Chain
Chain: A, B, E, F, I, J, M, N, Q, R
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Human Immunoglobulin M Was Purified From The A Patient With Waldenstrom'S Disease;

Molecule: Iga1 Heavy Chain
Chain: C, D, G, H, K, L, O, P, S, T

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Human Immunoglobulin M Was Purified From The A Patient With Waldenstrom'S Disease;

Molecule: J Chain
Chain: U

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Human Immunoglobulin M Was Purified From The A Patient With Waldenstrom'S Disease
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Solution Scatteringresolution
Gene
Ontology
ChainFunctionProcessComponent
S, O, T, P, K, H, C, D, G, L


Primary referenceSolution structure of human and mouse immunoglobulin M by synchrotron X-ray scattering and molecular graphics modelling. A possible mechanism for complement activation., Perkins SJ, Nealis AS, Sutton BJ, Feinstein A, J Mol Biol. 1991 Oct 20;221(4):1345-66. PMID:1942055
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk]
  • Biological Unit Coordinates (2rcj.pdb1.gz) 136 Kb
  • CSU: Contacts of Structural Units for 2RCJ
  • Likely Quarternary Molecular Structure file(s) for 2RCJ
  • Retrieve 2RCJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RCJ from S2C, [Save to disk]
  • View 2RCJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2RCJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RCJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rcj_F] [2rcj_N] [2rcj_T] [2rcj_P] [2rcj_A] [2rcj_U] [2rcj_K] [2rcj_D] [2rcj_L] [2rcj_M] [2rcj_H] [2rcj_S] [2rcj_G] [2rcj_O] [2rcj_C] [2rcj] [2rcj_Q] [2rcj_I] [2rcj_J] [2rcj_E] [2rcj_R] [2rcj_B]
  • SWISS-PROT database: [P01772]
  • Domain organization of [HV311_HUMAN] by SWISSPFAM
  • Domains found in 2RCJ: [IG_like] [IGc1] [IGv ] by SMART
  • Other resources with information on 2RCJ
  • Community annotation for 2RCJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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