2RER Biosynthetic Protein date Sep 26, 2007
title Crystal Structure Of The Aromatasecyclase Domain Of Tcmn Fr Streptomyces Glaucescens
authors B.D.Ames, T.P.Korman, T.N.Vu, S.C.Tsai
compound source
Molecule: Multifunctional Cyclase-Dehydratase-3-O-Methyl Tr Tcmn;
Chain: A
Fragment: N-Terminal Domain
Engineered: Yes
Organism_scientific: Streptomyces Glaucescens
Organism_taxid: 1907
Gene: Tcmn
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: C 2 2 21
R_factor 0.215 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.660 105.126 50.259 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
Primary referenceCrystal structure and functional analysis of tetracenomycin ARO/CYC: implications for cyclization specificity of aromatic polyketides., Ames BD, Korman TP, Zhang W, Smith P, Vu T, Tang Y, Tsai SC, Proc Natl Acad Sci U S A. 2008 Apr 8;105(14):5349-54. Epub 2008 Apr 3. PMID:18388203
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (2rer.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 2RER
  • Likely Quarternary Molecular Structure file(s) for 2RER
  • Structure Factors (118 Kb)
  • Retrieve 2RER in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RER from S2C, [Save to disk]
  • Re-refined 2rer structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2RER in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2RER
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RER, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rer_A] [2rer]
  • SWISS-PROT database: [P16559]
  • Domain organization of [TCMN_STRGA] by SWISSPFAM
  • Other resources with information on 2RER
  • Community annotation for 2RER at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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