2REW Transcription date Sep 27, 2007
title Crystal Structure Of Pparalpha Ligand Binding Domain With Bm
authors J.Muckelbauer
compound source
Molecule: Peroxisome Proliferator-Activated Receptor Alpha
Chain: A
Fragment: Ligand Binding Domain, Residues 196-468
Synonym: Ppar-Alpha
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ppara, Nr1c1, Ppar
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 31 2 1
R_factor 0.197 R_Free 0.245
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.264 78.264 98.715 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.35 Å
ligand CPQ, REW BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (2rew.pdb1.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 2REW
  • CSU: Contacts of Structural Units for 2REW
  • Likely Quarternary Molecular Structure file(s) for 2REW
  • Structure Factors (513 Kb)
  • Retrieve 2REW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2REW from S2C, [Save to disk]
  • Re-refined 2rew structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2REW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2REW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2REW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rew] [2rew_A]
  • SWISS-PROT database: [Q07869]
  • Domain organization of [PPARA_HUMAN] by SWISSPFAM
  • Domain found in 2REW: [HOLI ] by SMART
  • Other resources with information on 2REW
  • Community annotation for 2REW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science