2RKY	Cell Adhesion	date	Oct 18, 2007
title	Crystal Structure Of The Fourth And Fifth Fibronectin F1 Mod Complex With A Fragment Of Staphylococcus Aureus Fnbpa-1
authors	R.J.Bingham
compound		source
Molecule: Fibronectin Chain: A, C Fragment: Unp Residues 183-275 Synonym: Human Fibronectin Module Pair 4f1-5f1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Fn1 Expression_system: Pichia Pastoris Expression_system_taxid: 4922 Expression_system_strain: Gs115
Molecule: Fibronectin-Binding Protein Chain: B, D Fragment: Unp Residues 508-530 Synonym: Staphylococcus Aureus Fibronectin Binding Protein, Engineered: Yes		Synthetic: Yes Other_details: Peptide Synthesis
symmetry	Space Group: P 21 21 2	R_factor 0.181 R_Free 0.216
crystal cell	length a length b length c angle alpha angle beta angle gamma 88.596 36.244 73.551 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	K, SCN	enzyme
Gene Ontology	Chain Function Process Component A, C
Primary reference	Crystal structures of fibronectin-binding sites from Staphylococcus aureus FnBPA in complex with fibronectin domains., Bingham RJ, Rudino-Pinera E, Meenan NA, Schwarz-Linek U, Turkenburg JP, Hook M, Garman EF, Potts JR, Proc Natl Acad Sci U S A. 2008 Aug 26;105(34):12254-8. Epub 2008 Aug 19. PMID:18713862

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk] Biological Unit Coordinates (2rky.pdb1.gz) 21 Kb Biological Unit Coordinates (2rky.pdb2.gz) 21 Kb LPC: Ligand-Protein Contacts for 2RKY CSU: Contacts of Structural Units for 2RKY Likely Quarternary Molecular Structure file(s) for 2RKY Structure Factors (162 Kb) Retrieve 2RKY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2RKY from S2C, [Save to disk] Re-refined 2rky structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2RKY in 3D

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Visual 3D analysis of 2RKY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2RKY, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2rky_B] [2rky_A] [2rky] [2rky_C] [2rky_D] SWISS-PROT database: [P02751] [P14738] Domain organization of [FINC_HUMAN] [FNBA_STAA8] by SWISSPFAM Domain found in 2RKY: [FN1 ] by SMART

Other resources with information on 2RKY

Community annotation for 2RKY at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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