2RRF Unknown Function date Aug 03, 2010
title The Solution Structure Of The C-Terminal Region Of Zinc Fing Domain-Containing Protein 21
authors S.Koshiba, T.Tomizawa, F.Hayashi, N.Tochio, T.Harada, S.Watanabe, S.Yokoyama
compound source
Molecule: Zinc Finger Fyve Domain-Containing Protein 21
Chain: A
Fragment: C-Terminal Region, Unp Residues 107-234
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Cell-Free Synthesis
Expression_system_vector_type: Vector
Expression_system_vector: P070129-04
Other_details: E. Coli Cell-Free
methodSolution NMR
Primary referenceZF21, a regulator of the disassembly of focal adhesions and cancer metastasis contains a novel non-canonical pleckstrin homology domain., Nagano M, Hoshino D, Koshiba S, Shuo T, Koshikawa N, Tomizawa T, Hayashi F, Tochio N, Harada T, Akizawa T, Watanabe S, Handa N, Shirouzu M, Kigawa T, Yokoyama S, Seiki M, J Biol Chem. 2011 Jul 15. PMID:21768110
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (690 Kb) [Save to disk]
  • Biological Unit Coordinates (2rrf.pdb1.gz) 35 Kb
  • CSU: Contacts of Structural Units for 2RRF
  • Original NMR restraints for 2RRF from PDB
  • Retrieve 2RRF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RRF from S2C, [Save to disk]
    • View 2RRF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2RRF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RRF, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rrf] [2rrf_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2RRF
  • Community annotation for 2RRF at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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