2RRI Hormone date Dec 21, 2010
title Nmr Structure Of Vasoactive Intestinal Peptide In Dpc Micell
authors Y.Umetsu, T.Tenno, N.Goda, M.Shirakawa, T.Ikegami, H.Hiroaki
compound source
Molecule: Vasoactive Intestinal Peptide
Chain: A
Fragment: Unp Residues 125-153
Synonym: Vip, Vasoactive Intestinal Polypeptide
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Vector
Expression_system_vector: Presat-Vector
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural difference of vasoactive intestinal peptide in two distinct membrane-mimicking environments., Umetsu Y, Tenno T, Goda N, Shirakawa M, Ikegami T, Hiroaki H, Biochim Biophys Acta. 2011 May;1814(5):724-30. Epub 2011 Mar 23. PMID:21439408
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (158 Kb) [Save to disk]
  • Biological Unit Coordinates (2rri.pdb1.gz) 8 Kb
  • CSU: Contacts of Structural Units for 2RRI
  • Original NMR restraints for 2RRI from PDB
  • Retrieve 2RRI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RRI from S2C, [Save to disk]
    • View 2RRI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2RRI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RRI, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rri_A] [2rri]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2RRI: [GLUCA ] by SMART
    • Other resources with information on 2RRI
  • Community annotation for 2RRI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science