2RSV Transferase date Jul 12, 2012
title Solution Structure Of Human Full-Length Vaccinia Related Kin (Vrk1)
authors S.Koshiba, N.Tochio, J.Yokoyama, T.Kigawa
compound source
Molecule: Serinethreonine-Protein Kinase Vrk1
Chain: A
Synonym: Vaccinia-Related Kinase 1
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Vrk1
Expression_system: Cell-Free Synthesis
Expression_system_vector_type: Vector
Expression_system_vector: P060908-04
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1961 Kb) [Save to disk]
  • Biological Unit Coordinates (2rsv.pdb1.gz) 110 Kb
  • CSU: Contacts of Structural Units for 2RSV
  • Original NMR restraints for 2RSV from PDB
  • Retrieve 2RSV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RSV from S2C, [Save to disk]
  • View 2RSV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2RSV
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2RSV, from MSDmotif at EBI
  • Fold representative 2rsv from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rsv] [2rsv_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2RSV: [STYKc ] by SMART
  • Other resources with information on 2RSV
  • Community annotation for 2RSV at PDBWiki (http://pdbwiki.org)

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