2RUK Transcription date Sep 24, 2014
title Solution Structure Of The Complex Between P53 Transactivatio And Tfiih P62 Ph Domain
authors M.Okuda, Y.Nishimura
compound source
Molecule: Cellular Tumor Antigen P53
Chain: A
Fragment: P53 Transactivation Domain, Unp Residues 41-62
Synonym: Tumor Suppressor P53
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tp53
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: General Transcription Factor Iih Subunit 1
Chain: B
Fragment: Tfiih P62 Ph Domain, Unp Residues 1-108
Synonym: Basic Transcription Factor 2 62 Kda Subunit, Btf2 General Transcription Factor Iih Polypeptide 1, Tfiih Basal Transcription Factor Complex P62 Subunit;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Btf2, Gtf2h1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
ligand SEP, TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceExtended String Binding Mode of the Phosphorylated Transactivation Domain of Tumor Suppressor p53., Okuda M, Nishimura Y, J Am Chem Soc. 2014 Sep 29. PMID:25216154
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (682 Kb) [Save to disk]
  • Biological Unit Coordinates (2ruk.pdb1.gz) 35 Kb
  • LPC: Ligand-Protein Contacts for 2RUK
  • CSU: Contacts of Structural Units for 2RUK
  • Original NMR restraints for 2RUK from PDB
  • Retrieve 2RUK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RUK from S2C, [Save to disk]
  • View 2RUK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2RUK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RUK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ruk_A] [2ruk] [2ruk_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2RUK
  • Community annotation for 2RUK at PDBWiki (http://pdbwiki.org)

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