2RV8 Dna Binding Protein date Apr 17, 2015
title Solution Structure Of The Phop Dna-Binding Domain From Mycob Tuberculosis
authors R.Macdonald, D.Sarkar, B.R.Amer, R.T.Clubb
compound source
Molecule: Dna-Binding Response Regulator
Chain: A
Fragment: Phopc (Phop C-Terminal Domain), Unp Residues 141-
Engineered: Yes
 Organism_scientific: Mycobacterium Tuberculosis Casnitr204
Organism_taxid: 1310114
Gene: J113_05350
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet-15b
methodSolution NMR
Gene J113
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of the PhoP DNA-binding domain from Mycobacterium tuberculosis., Macdonald R, Sarkar D, Amer BR, Clubb RT, J Biomol NMR. 2015 Jul 25. PMID:26209027
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1023 Kb) [Save to disk]
  • Biological Unit Coordinates (2rv8.pdb1.gz) 35 Kb
  • CSU: Contacts of Structural Units for 2RV8
  • Original NMR restraints for 2RV8 from PDB
  • Retrieve 2RV8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RV8 from S2C, [Save to disk]
    • View 2RV8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2RV8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rv8_A] [2rv8]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2RV8: [Trans_reg_C ] by SMART
    • Other resources with information on 2RV8
  • Community annotation for 2RV8 at PDBWiki (http://pdbwiki.org)

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