2TOH Hydroxylase date Aug 26, 1998
title Tyrosine Hydroxylase Catalytic And Tetramerization Domains F
authors K.E.Goodwill, C.Sabatier, R.C.Stevens
compound source
Molecule: Tyrosine 3-Monooxygenase
Chain: A
Fragment: Catalytic And Tetramerization Domains, Residues 1
Synonym: Tyroh
Ec: 1.14.16.2
Engineered: Yes
Other_details: Iron And 7,8-Dihydrobiopterin At The Active
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Strain: Bl21 (De3) Plyss
Organ: Adrenal Gland
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3) Plyss
Expression_system_plasmid: Petohd155
Other_details: First 155 Residues Truncated
symmetry Space Group: F 2 2 2
R_factor 0.207 R_Free 0.276
crystal
cell
length a length b length c angle alpha angle beta angle gamma
189.464 148.595 56.986 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand CL, FE, HBI, MTY enzyme Oxidoreductase E.C.1.14.16.2 BRENDA
note 2TOH (Molecule of the Month:pdb61)
related structures by homologous chain: 1PHZ, 1TOH
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of tyrosine hydroxylase with bound cofactor analogue and iron at 2.3 A resolution: self-hydroxylation of Phe300 and the pterin-binding site., Goodwill KE, Sabatier C, Stevens RC, Biochemistry 1998 Sep 29;37(39):13437-45. PMID:9753429
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (2toh.pdb1.gz) 228 Kb
  • LPC: Ligand-Protein Contacts for 2TOH
  • CSU: Contacts of Structural Units for 2TOH
  • Likely Quarternary Molecular Structure file(s) for 2TOH
  • Structure Factors (136 Kb)
  • Retrieve 2TOH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2TOH from S2C, [Save to disk]
  • Re-refined 2toh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2TOH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2TOH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2TOH, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2toha_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2toh_A] [2toh]
  • SWISS-PROT database: [P04177]
  • Domain organization of [TY3H_RAT] by SWISSPFAM
  • Other resources with information on 2TOH
  • Community annotation for 2TOH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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