2U1A Nuclear Protein date Mar 26, 1997
title Rna Binding Domain 2 Of Human U1a Protein, Nmr, 20 Structures
authors J.Lu, K.B.Hall
compound source
Molecule: U1 Small Nuclear Ribonucleoprotein A
Chain: A
Fragment: Rna Binding Domain 2, Rbd2
Synonym: U1 Snrnp A Protein
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pha
Expression_system: Escherichia Coli Str. K-12 Substr. Mg1655;
Expression_system_taxid: 511145
Expression_system_strain: Mg1655
Expression_system_cellular_location: Cytoplasm
Expression_system_vector_type: Bacteria
Expression_system_vector: Pav105
Expression_system_plasmid: 1603 Tac2
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTertiary structure of RBD2 and backbone dynamics of RBD1 and RBD2 of the human U1A protein determined by NMR spectroscopy., Lu J, Hall KB, Biochemistry 1997 Aug 26;36(34):10393-405. PMID:9265619
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (470 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2U1A
  • Original NMR restraints for 2U1A from PDB
  • Retrieve 2U1A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2U1A from S2C, [Save to disk]
  • View 2U1A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2U1A
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2U1A, from MSDmotif at EBI
  • Genome occurence of 2U1A's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2u1a__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 2u1a from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2u1a_A] [2u1a]
  • SWISS-PROT database: [P09012]
  • Domain organization of [SNRPA_HUMAN] by SWISSPFAM
  • Domain found in 2U1A: [RRM ] by SMART
  • Other resources with information on 2U1A
  • Community annotation for 2U1A at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 2U1A from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science