2UWD Chaperone date Mar 20, 2007
title Inhibition Of The Hsp90 Molecular Chaperone In Vitro And In Vivo By Novel, Synthetic, Potent Resorcinylic Pyrazole, Isoxazole Amide Analogs
authors S.Y.Sharp, C.Prodromou, K.Boxall, M.V.Powers, J.L.Holmes, G.Box, T.P.Matthews, K.M.Cheung, A.Kalusa, K.James, A.Hayes, A.Hardcastle, B.Dymock, P.A.Brough, X.Barril, J.E.Cansfield, L.M.Wright, A.Surgenor, N.Foloppe, W.Aherne, L.Pearl, K.Jones, E.Mcdonald, F.Raynaud, S.Eccles, M.Drysdale, P.Workman
compound source
Molecule: Heat Shock Protein Hsp 90-Alpha
Chain: A
Synonym: Heat Shock Protein Hsp90-Alpha, Hsp 86, Renal Carcinoma Antigen Ny-Ren-38;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Skin
Tissue: Melanoma
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 2 2
R_factor 0.201 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.297 88.683 99.701 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.9 Å
ligand 2GG, MG, SO4 BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceInhibition of the heat shock protein 90 molecular chaperone in vitro and in vivo by novel, synthetic, potent resorcinylic pyrazole/isoxazole amide analogues., Sharp SY, Prodromou C, Boxall K, Powers MV, Holmes JL, Box G, Matthews TP, Cheung KM, Kalusa A, James K, Hayes A, Hardcastle A, Dymock B, Brough PA, Barril X, Cansfield JE, Wright L, Surgenor A, Foloppe N, Hubbard RE, Aherne W, Pearl L, Jones K, McDonald E, Raynaud F, Eccles S, Drysdale M, Workman P, Mol Cancer Ther. 2007 Apr;6(4):1198-211. PMID:17431102
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (2uwd.pdb1.gz) 80 Kb
  • LPC: Ligand-Protein Contacts for 2UWD
  • CSU: Contacts of Structural Units for 2UWD
  • Likely Quarternary Molecular Structure file(s) for 2UWD
  • Structure Factors (151 Kb)
  • Retrieve 2UWD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2UWD from S2C, [Save to disk]
  • Re-refined 2uwd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2UWD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2UWD
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2UWD, from MSDmotif at EBI
  • Fold representative 2uwd from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2uwd_A] [2uwd]
  • SWISS-PROT database: [P07900]
  • Domain organization of [HS90A_HUMAN] by SWISSPFAM
  • Domain found in 2UWD: [HATPase_c ] by SMART
  • Alignments of the sequence of 2UWD with the sequences similar proteins can be viewed for 2UWD's classification [HS90A_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [HS90A_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2UWD
  • Community annotation for 2UWD at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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