2UWM	Translation	date	Mar 22, 2007
title	C-Terminal Domain(Wh2-Wh4) Of Elongation Factor Selb In Comp Secis Rna
authors	T.Ose, N.Soler, L.Rasubala, K.Kuroki, D.Kohda, D.Fourmy, S.Yoshiza K.Maenaka
compound		source
Molecule: Selenocysteine-Specific Elongation Factor Chain: A, B Fragment: Secis Binding Domain, Residues 377-634 Synonym: Selb Translation Factor Engineered: Yes		Organism_scientific: Moorella Thermoacetica Organism_taxid: 1525 Atcc: 39073 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-2t
Molecule: 5'-R(Gpgpcpgpupupgpcpcpgp Gpupcpupgpgpcpapapcpgpcpc)-3'; Chain: C, D Synonym: Mrna Engineered: Yes		Synthetic: Yes Organism_scientific: Moorella Thermoacetica Organism_taxid: 1525
symmetry	Space Group: C 1 2 1	R_factor 0.200 R_Free 0.238
crystal cell	length a length b length c angle alpha angle beta angle gamma 160.074 119.843 50.461 90.00 100.05 90.00
method	X-Ray Diffraction	resolution	2.31 Å
note	2UWM (Molecule of the Month:pdb104)
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural basis for dynamic interdomain movement and RNA recognition of the selenocysteine-specific elongation factor SelB., Ose T, Soler N, Rasubala L, Kuroki K, Kohda D, Fourmy D, Yoshizawa S, Maenaka K, Structure. 2007 May;15(5):577-86. PMID:17502103

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk] Biological Unit Coordinates (2uwm.pdb1.gz) 88 Kb CSU: Contacts of Structural Units for 2UWM Likely Quarternary Molecular Structure file(s) for 2UWM Structure Factors (316 Kb) Retrieve 2UWM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2UWM from S2C, [Save to disk] Re-refined 2uwm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2UWM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2UWM

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2UWM, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2uwm_D] [2uwm_B] [2uwm_A] [2uwm_C] [2uwm] SWISS-PROT database: [Q2RFK4] [Q46455] Domain organization of [Q2RFK4_MOOTA] [SELB_MOOTH] by SWISSPFAM

Other resources with information on 2UWM

Community annotation for 2UWM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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