2UXD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand K, MG, PAR, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B


C


D


E


F


G


H


I


J


K


L


M


N


O


P


Q


R


S


T


V


Primary referenceStructures of tRNAs with an expanded anticodon loop in the decoding center of the 30S ribosomal subunit., Dunham CM, Selmer M, Phelps SS, Kelley AC, Suzuki T, Joseph S, Ramakrishnan V, RNA. 2007 Jun;13(6):817-23. Epub 2007 Apr 6. PMID:17416634
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (925 Kb) [Save to disk]
  • Biological Unit Coordinates (2uxd.pdb1.gz) 913 Kb
  • LPC: Ligand-Protein Contacts for 2UXD
  • CSU: Contacts of Structural Units for 2UXD
  • Likely Quarternary Molecular Structure file(s) for 2UXD
  • Structure Factors (2886 Kb)
  • Retrieve 2UXD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2UXD from S2C, [Save to disk]
  • Re-refined 2uxd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2UXD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2uxd] [2uxd_G] [2uxd_H] [2uxd_I] [2uxd_J] [2uxd_K] [2uxd_L] [2uxd_M] [2uxd_N] [2uxd_O] [2uxd_P] [2uxd_Q] [2uxd_R] [2uxd_S] [2uxd_T] [2uxd_V] [2uxd_X] [2uxd_Y] [2uxd_A] [2uxd_B] [2uxd_C] [2uxd_D] [2uxd_E] [2uxd_F]
  • SWISS-PROT database: [Q5SHN7] [P80376] [Q5SHN3] [P80377] [Q5SHQ1] [Q5SJ76] [Q5SJH3] [Q5SHP7] [Q5SLQ0] [Q5SHP2] [P62661] [P80371] [P80372] [P80373] [Q5SHQ5] [Q5SLP8] [P17291] [Q5SHQ2] [P62669] [Q5SIH3]
  • Domains found in 2UXD: [KH] [Ribosomal_S10] [Ribosomal_S15] [Ribosomal_S4] [S4 ] by SMART

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