2UXW Oxidoreductase date Mar 30, 2007
title Crystal Structure Of Human Very Long Chain Acyl-Coa Dehydrog (Acadvl)
authors A.C.W.Pike, V.Hozjan, C.Smee, G.Berridge, N.Burgess, E.Salah, G.Bu J.Uppenberg, E.Ugochukwu, F.Von Delft, C.H.Arrowsmith, A.Edward J.Weigelt, M.Sundstrom, U.Oppermann
compound source
Molecule: Very-Long-Chain Specific Acyl-Coa Dehydrogenase
Chain: A
Fragment: Residues 72-655
Synonym: Vlcad, Acyl-Coa Dehydrogenase
Ec: 1.3.99.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: R3-Prare2
Expression_system_plasmid: Pnic28-Bsa4
symmetry Space Group: C 2 2 21
R_factor 0.148 R_Free 0.170
crystal
cell
length a length b length c angle alpha angle beta angle gamma
75.001 108.173 149.731 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.45 Å
ligand EDO, FAD, TH3 enzyme Oxidoreductase E.C.1.3.99 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk]
  • Biological Unit Coordinates (2uxw.pdb1.gz) 194 Kb
  • LPC: Ligand-Protein Contacts for 2UXW
  • CSU: Contacts of Structural Units for 2UXW
  • Likely Quarternary Molecular Structure file(s) for 2UXW
  • Structure Factors (1448 Kb)
  • Retrieve 2UXW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2UXW from S2C, [Save to disk]
  • Re-refined 2uxw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2UXW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2UXW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2UXW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2uxw_A] [2uxw]
  • SWISS-PROT database: [P49748]
  • Domain organization of [ACADV_HUMAN] by SWISSPFAM
  • Other resources with information on 2UXW
  • Community annotation for 2UXW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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