2UYC Transferase date Apr 03, 2007
title Hhai Dna Methyltransferase R163n Mutant Complex With 13mer G Oligonucleotide And Sah
authors D.Daujotyte, S.Grazulis
compound source
Molecule: Modification Methylase Hhai
Chain: A
Synonym: Cytosine-Specific Methyltransferase Hhai, Mhhai, H Methyltransferase;
Ec: 2.1.1.37
Engineered: Yes
Mutation: Yes
Organism_scientific: Haemophilus Haemolyticus
Organism_taxid: 726
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Er2267
Expression_system_plasmid: Phh5.3

Molecule: 5'-D(Tpgpgpaptpgp5cmpgpcptp Gpapc)-3
Chain: C
Engineered: Yes

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630

Molecule: 5'-D(Gptpcpapgpcpgpcpaptp Cpc)-3'
Chain: D
Engineered: Yes

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
symmetry Space Group: H 3 2
R_factor 0.200 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.990 94.990 312.903 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand 5CM, GOL, SAH, SO4 enzyme Transferase E.C.2.1.1.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • DNA (cytosine-5-)-methyltran...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (2uyc.pdb1.gz) 70 Kb
  • LPC: Ligand-Protein Contacts for 2UYC
  • CSU: Contacts of Structural Units for 2UYC
  • Likely Quarternary Molecular Structure file(s) for 2UYC
  • Structure Factors (425 Kb)
  • Retrieve 2UYC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2UYC from S2C, [Save to disk]
  • Re-refined 2uyc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2UYC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2UYC
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2UYC, from MSDmotif at EBI
  • Fold representative 2uyc from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2uyc] [2uyc_C] [2uyc_A] [2uyc_D]
  • SWISS-PROT database: [P05102]
  • Domain organization of [MTH1_HAEPH] by SWISSPFAM
  • Other resources with information on 2UYC
  • Community annotation for 2UYC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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