2UZG Hydrolase date Apr 27, 2007
title Zf-Ubp Domain Of Vdu1
authors M.D.Allen, M.Bycroft
compound source
Molecule: Ubiquitin Carboxyl-Terminal Hydrolase 33
Chain: A
Fragment: Residues 36-130
Synonym: Ubiquitin Thioesterase 33, Ubiquitin-Specific-Proc Protease 33, Deubiquitinating Enzyme 33, Vhl-Interacting Deubiquitinating Enzyme 1;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: C41
Expression_system_vector: Modified Prseta
methodSolution NMR
ligand ZN enzyme
note 2UZG is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe solution structure of the ZnF UBP domain of USP33/VDU1., Allen MD, Bycroft M, Protein Sci. 2007 Sep;16(9):2072-5. PMID:17766394
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (495 Kb) [Save to disk]
  • Biological Unit Coordinates (2uzg.pdb1.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 2UZG
  • CSU: Contacts of Structural Units for 2UZG
  • Original NMR restraints for 2UZG from PDB
  • Retrieve 2UZG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2UZG from S2C, [Save to disk]
    • View 2UZG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2UZG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2UZG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2uzg] [2uzg_A]
  • SWISS-PROT database: [Q8TEY7]
  • Domain organization of [UBP33_HUMAN] by SWISSPFAM
  • Domain found in 2UZG: [ZnF_UBP ] by SMART
    • Other resources with information on 2UZG
  • Community annotation for 2UZG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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