2V14 Transport Protein date May 21, 2007
title Kinesin 16b Phox-Homology Domain (Kif16b)
authors M.I.Wilson, R.L.Williams, W.Cho, W.Hong, N.R.Blatner
compound source
Molecule: Kinesin-Like Motor Protein C20orf23
Chain: A
Fragment: Phox-Homology Domain, Residues 1179-1312
Synonym: Kif16b Kinesin-3 Motor Protein, Sorting Nexin-23
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834(De3)Plyss
symmetry Space Group: I 2 3
R_factor 0.209 R_Free 0.287
crystal
cell
length a length b length c angle alpha angle beta angle gamma
100.894 100.894 100.894 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand MSE enzyme
note 2V14 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structural basis of novel endosome anchoring activity of KIF16B kinesin., Blatner NR, Wilson MI, Lei C, Hong W, Murray D, Williams RL, Cho W, EMBO J. 2007 Jul 19;. PMID:17641687
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk]
  • Biological Unit Coordinates (2v14.pdb1.gz) 25 Kb
  • LPC: Ligand-Protein Contacts for 2V14
  • CSU: Contacts of Structural Units for 2V14
  • Likely Quarternary Molecular Structure file(s) for 2V14
  • Structure Factors (533 Kb)
  • Retrieve 2V14 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2V14 from S2C, [Save to disk]
  • Re-refined 2v14 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2V14 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2V14
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2V14, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2v14_A] [2v14]
  • SWISS-PROT database: [Q96L93]
  • Domain organization of [KI16B_HUMAN] by SWISSPFAM
  • Domain found in 2V14: [PX ] by SMART
  • Other resources with information on 2V14
  • Community annotation for 2V14 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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