2V2T	Transcription	date	Jun 07, 2007
title	X-Ray Structure Of A Nf-Kb P50-Relb-Dna Complex
authors	A.K.Moorthy, D.B.Huang, V.Y.Wang, D.Vu, G.Ghosh
compound		source
Molecule: Transcription Factor Relb Chain: A Fragment: Residues 91-378 Synonym: Relb Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Cell_line: Nf-Kb1 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21
Molecule: Nuclear Factor Nf-Kappa-B P105 Subunit Chain: B Fragment: Nuclear Factor Nf-Kappa-B P50 Subunit, Residues 3 Synonym: Dna-Binding Factor Kbf1, Ebp-1, Nf-Kappa-B1 P84nf P98, P50; Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Cell_line: Nf-Kb1 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21
Molecule: 5'-D(Cpgpgpgpapaptptpcpcpcp)-3' Chain: C, D Engineered: Yes		Synthetic: Yes
symmetry	Space Group: P 61 2 2	R_factor 0.238 R_Free 0.276
crystal cell	length a length b length c angle alpha angle beta angle gamma 91.440 91.440 419.970 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	3.05 Å
Gene Ontology	Chain Function Process Component A B
Primary reference	X-ray Structure of a NF-kappaB p50/RelB/DNA Complex Reveals Assembly of Multiple Dimers on Tandem kappaB Sites., Moorthy AK, Huang DB, Wang VY, Vu D, Ghosh G, J Mol Biol. 2007 Oct 26;373(3):723-34. Epub 2007 Aug 22. PMID:17869269

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk] Biological Unit Coordinates (2v2t.pdb1.gz) 104 Kb CSU: Contacts of Structural Units for 2V2T Likely Quarternary Molecular Structure file(s) for 2V2T Retrieve 2V2T in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2V2T from S2C, [Save to disk]

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Visual 3D analysis of 2V2T

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2V2T, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2v2t_A] [2v2t_C] [2v2t_D] [2v2t_B] [2v2t] SWISS-PROT database: [P25799] [Q04863] Domain organization of [NFKB1_MOUSE] [RELB_MOUSE] by SWISSPFAM Domain found in 2V2T: [IPT ] by SMART

Other resources with information on 2V2T

Community annotation for 2V2T at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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