2V69	Oxidoreductase	date	Jul 14, 2007
title	Crystal Structure Of Chlamydomonas Reinhardtii Rubisco With Subunit Mutation D473e
authors	S.Karkehabadi, S.Satagopan, T.C.Taylor, R.J.Spreitzer, I.Anderss
compound		source
Molecule: Ribulose Bisphosphate Carboxylase Large Chain Chain: A, B, C, D, E, F, G, H Synonym: Ribulose-1,5-Bisphosphate Carboxylase Large Chain, Large Subunit; Ec: 4.1.1.39 Engineered: Yes Mutation: Yes		Organism_scientific: Chlamydomonas Reinhardtii Organism_taxid: 3055 Strain: 2137 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Ribulose Bisphosphate Carboxylase Small Chain 1 Chain: I, J, K, L, M, N, O, P Synonym: Ribulose-1,5-Bisphosphate Carboxylase Small Chain, Small Subunit 1; Ec: 4.1.1.39 Engineered: Yes		Organism_scientific: Chlamydomonas Reinhardtii Organism_taxid: 3055 Strain: 2137 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.197 R_Free 0.228
crystal cell	length a length b length c angle alpha angle beta angle gamma 114.242 169.140 137.179 90.00 96.24 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	CAP, EDO, HYP, KCX, MG, MME, SMC	enzyme	Lyase E.C.4.1.1.39 BRENDA
Gene Ontology	Chain Function Process Component F, A, E, B, H, C, D, G
Primary reference	Structural Analysis of Altered Large-Subunit Loop-6/Carboxy-Terminus Interactions That Influence Catalytic Efficiency and CO(2)/O(2) Specificity of Ribulose-1,5-bisphosphate Carboxylase/Oxygenase(,)., Karkehabadi S, Satagopan S, Taylor TC, Spreitzer RJ, Andersson I, Biochemistry. 2007 Oct 2;46(39):11080-9. Epub 2007 Sep 8. PMID:17824672

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (769 Kb) [Save to disk] Biological Unit Coordinates (2v69.pdb1.gz) 755 Kb LPC: Ligand-Protein Contacts for 2V69 CSU: Contacts of Structural Units for 2V69 Likely Quarternary Molecular Structure file(s) for 2V69 Structure Factors (967 Kb) Retrieve 2V69 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2V69 from S2C, [Save to disk] Re-refined 2v69 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2V69 in 3D

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Visual 3D analysis of 2V69

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2V69, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2v69_F] [2v69_B] [2v69_C] [2v69_A] [2v69_E] [2v69_P] [2v69_L] [2v69_G] [2v69_O] [2v69_J] [2v69_H] [2v69_K] [2v69_I] [2v69_N] [2v69_M] [2v69_D] [2v69] SWISS-PROT database: [P00877] [P00873] Domain organization of [RBL_CHLRE] [RBS1_CHLRE] by SWISSPFAM Domain found in 2V69: [RuBisCO_small ] by SMART

Other resources with information on 2V69

Community annotation for 2V69 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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