2V6H Cell Adhesion date Jul 18, 2007
title Crystal Structure Of The C1 Domain Of Cardiac Myosin Binding
authors L.Govata, L.Carpenter, P.C.A.Da Fonseca, J.R.Helliwell, P.J.Rizk E.Flashman, N.E.Chayen, C.Redwood, J.M.Squire
compound source
Molecule: Myosin-Binding Protein C, Cardiac-Type
Chain: A
Fragment: C1 Domain, Residues 151-258
Synonym: Cardiac Mybp-C, C-Protein, Cardiac Muscle Isoform
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Heart
Tissue: Cardiac
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet28a
symmetry Space Group: I 41
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.848 48.848 95.132 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.55 Å
Primary referenceCrystal structure of the C1 domain of cardiac myosin binding protein-C: implications for hypertrophic cardiomyopathy., Govada L, Carpenter L, da Fonseca PC, Helliwell JR, Rizkallah P, Flashman E, Chayen NE, Redwood C, Squire JM, J Mol Biol. 2008 Apr 25;378(2):387-97. Epub 2008 Mar 4. PMID:18374358
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (2v6h.pdb1.gz) 41 Kb
  • CSU: Contacts of Structural Units for 2V6H
  • Likely Quarternary Molecular Structure file(s) for 2V6H
  • Structure Factors (117 Kb)
  • Retrieve 2V6H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2V6H from S2C, [Save to disk]
  • Re-refined 2v6h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2V6H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2V6H
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2V6H, from MSDmotif at EBI
  • Fold representative 2v6h from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2v6h] [2v6h_A]
  • SWISS-PROT database: [Q14896]
  • Domain organization of [MYPC3_HUMAN] by SWISSPFAM
  • Domain found in 2V6H: [IG ] by SMART
  • Other resources with information on 2V6H
  • Community annotation for 2V6H at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science