2V9T	Structural Protein Receptor	date	Aug 25, 2007
title	Complex Between The Second Lrr Domain Of Slit2 And The First Ig Domain From Robo1
authors	C.Morlot, S.Cusack, A.A.Mccarthy
compound		source
Molecule: Roundabout Homolog 1 Chain: A Fragment: Ig1-2m, Residues 61-166 Synonym: H-Robo-1, Deleted In U Twenty Twenty, Robo1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Homo Sapiens Expression_system_taxid: 9606 Expression_system_cell_line: Hek293-Ebna1 Expression_system_vector: Modified Ptt3
Molecule: Slit Homolog 2 Protein N-Product Chain: B Fragment: Second Lrr Domain, Residues 271-479 Synonym: Slit-2, Slit2, Slit Homolog 2 Protein Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Homo Sapiens Expression_system_taxid: 9606 Expression_system_cell_line: Hek293-Ebna1 Expression_system_vector: Modified Ptt3
symmetry	Space Group: P 21 21 2	R_factor 0.186 R_Free 0.226
crystal cell	length a length b length c angle alpha angle beta angle gamma 51.270 190.090 40.870 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.70 Å
Gene Ontology	Chain Function Process Component A B
Primary reference	Structural insights into the Slit-Robo complex., Morlot C, Thielens NM, Ravelli RB, Hemrika W, Romijn RA, Gros P, Cusack S, McCarthy AA, Proc Natl Acad Sci U S A. 2007 Sep 18;104(38):14923-8. Epub 2007 Sep 11. PMID:17848514

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk] Biological Unit Coordinates (2v9t.pdb1.gz) 59 Kb CSU: Contacts of Structural Units for 2V9T Likely Quarternary Molecular Structure file(s) for 2V9T Structure Factors (586 Kb) Retrieve 2V9T in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2V9T from S2C, [Save to disk] Re-refined 2v9t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2V9T in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2V9T

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2V9T, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2v9t_A] [2v9t] [2v9t_B] SWISS-PROT database: [Q9Y6N7] [O94813] Domain organization of [ROBO1_HUMAN] [SLIT2_HUMAN] by SWISSPFAM Domains found in 2V9T: [IGc2] [LRR] [LRRCT] [LRRNT] [LRR_TYP ] by SMART

Other resources with information on 2V9T

Community annotation for 2V9T at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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