2VA6 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand H24, IOD BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceApplication of Fragment-Based Lead Generation to the Discovery of Novel, Cyclic Amidine beta-Secretase Inhibitors with Nanomolar Potency, Cellular Activity, and High Ligand Efficiency., Edwards PD, Albert JS, Sylvester M, Aharony D, Andisik D, Callaghan O, Campbell JB, Carr RA, Chessari G, Congreve M, Frederickson M, Folmer RH, Geschwindner S, Koether G, Kolmodin K, Krumrine J, Mauger RC, Murray CW, Olsson LL, Patel S, Spear N, Tian G, J Med Chem. 2007 Nov 29;50(24):5912-5925. Epub 2007 Nov 7. PMID:17985862
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk]
  • Biological Unit Coordinates (2va6.pdb1.gz) 123 Kb
  • LPC: Ligand-Protein Contacts for 2VA6
  • CSU: Contacts of Structural Units for 2VA6
  • Likely Quarternary Molecular Structure file(s) for 2VA6
  • Structure Factors (255 Kb)
  • Retrieve 2VA6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VA6 from S2C, [Save to disk]
  • Re-refined 2va6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2VA6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2va6] [2va6_A]
  • SWISS-PROT database: [P56817]
  • Belongs to the β-amyloid cleaving enzyme (bace1) family according to TCDB.

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