2VAK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
J, D, I, H, E, K, L, C, F, G, A, B


Primary referenceCrystal structure of the avian reovirus inner capsid protein sigmaA., Guardado-Calvo P, Vazquez-Iglesias L, Martinez-Costas J, Llamas-Saiz AL, Schoehn G, Fox GC, Hermo-Parrado XL, Benavente J, van Raaij MJ, J Virol. 2008 Nov;82(22):11208-16. Epub 2008 Sep 17. PMID:18799570
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (819 Kb) [Save to disk]
  • Biological Unit Coordinates (2vak.pdb1.gz) 76 Kb
  • Biological Unit Coordinates (2vak.pdb2.gz) 74 Kb
  • Biological Unit Coordinates (2vak.pdb3.gz) 73 Kb
  • Biological Unit Coordinates (2vak.pdb4.gz) 74 Kb
  • Biological Unit Coordinates (2vak.pdb5.gz) 75 Kb
  • Biological Unit Coordinates (2vak.pdb6.gz) 76 Kb
  • Biological Unit Coordinates (2vak.pdb7.gz) 76 Kb
  • Biological Unit Coordinates (2vak.pdb8.gz) 76 Kb
  • Biological Unit Coordinates (2vak.pdb9.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 2VAK
  • CSU: Contacts of Structural Units for 2VAK
  • Likely Quarternary Molecular Structure file(s) for 2VAK
  • Structure Factors (2205 Kb)
  • Retrieve 2VAK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VAK from S2C, [Save to disk]
  • Re-refined 2vak structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2VAK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vak] [2vak_A] [2vak_B] [2vak_C] [2vak_D] [2vak_E] [2vak_F] [2vak_G] [2vak_H] [2vak_I] [2vak_J] [2vak_K] [2vak_L]
  • SWISS-PROT database: [Q9E6F8]

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