2VAQ	Lyase	date	Sep 04, 2007
title	Structure Of Strictosidine Synthase In Complex With Inhibito
authors	J.Maresh, L.A.Giddings, A.Friedrich, E.A.Loris, S.Panjikar, B.L.T J.Stoeckigt, B.Peters, S.E.O'Connor
compound		source
Molecule: Strictosidine Synthase Chain: A, B Ec: 4.3.3.2 Engineered: Yes Other_details: Complex With Inhibitor		Organism_scientific: Rauvolfia Serpentina Organism_common: Serpentwood Organism_taxid: 4060 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_variant: M15prep4 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pqe-2
symmetry	Space Group: H 3	R_factor 0.186 R_Free 0.247
crystal cell	length a length b length c angle alpha angle beta angle gamma 149.993 149.993 121.688 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	3.01 Å
ligand	VAW	enzyme	Lyase E.C.4.3.3.2 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Strictosidine synthase: mechanism of a Pictet-Spengler catalyzing enzyme., Maresh JJ, Giddings LA, Friedrich A, Loris EA, Panjikar S, Trout BL, Stockigt J, Peters B, O'Connor SE, J Am Chem Soc. 2008 Jan 16;130(2):710-23. PMID:18081287

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk] Biological Unit Coordinates (2vaq.pdb1.gz) 96 Kb LPC: Ligand-Protein Contacts for 2VAQ CSU: Contacts of Structural Units for 2VAQ Likely Quarternary Molecular Structure file(s) for 2VAQ Structure Factors (302 Kb) Retrieve 2VAQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2VAQ from S2C, [Save to disk] Re-refined 2vaq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2VAQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2VAQ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2VAQ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2vaq_A] [2vaq] [2vaq_B] SWISS-PROT database: [P68175] Domain organization of [STSY_RAUSE] by SWISSPFAM

Other resources with information on 2VAQ

Community annotation for 2VAQ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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