2VE9 Transport Protein date Oct 17, 2007
title Xray Structure Of Kops Bound Gamma Domain Of Ftsk (P. Aeruginosa)
authors J.Lowe, M.D.Allen, D.J.Sherratt
compound source
Molecule: Dna Translocase Ftsk
Chain: A, B, C, D, E, F
Fragment: Gamma Domain, Residues 739-811
Synonym: Ftsk
Engineered: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Atcc: 47085
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: 5'-D(Apcpcpapgpgpgpcpapgp Gpgpcpgp
Chain: I, K

Synthetic: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Atcc: 47085

Molecule: 5'-D(Gptpcpgpcpcpcptpgpcp Cpcptpgp
Chain: J, L

Synthetic: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Atcc: 47085
symmetry Space Group: C 1 2 1
R_factor 0.196 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
137.937 63.073 76.026 90.00 118.76 90.00
method X-Ray Diffractionresolution 1.9 Å
ligand MG enzyme
Primary referenceMolecular mechanism of sequence-directed DNA loading and translocation by FtsK., Lowe J, Ellonen A, Allen MD, Atkinson C, Sherratt DJ, Grainge I, Mol Cell. 2008 Aug 22;31(4):498-509. PMID:18722176
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (98 Kb) [Save to disk]
  • Biological Unit Coordinates (2ve9.pdb1.gz) 45 Kb
  • Biological Unit Coordinates (2ve9.pdb2.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 2VE9
  • CSU: Contacts of Structural Units for 2VE9
  • Likely Quarternary Molecular Structure file(s) for 2VE9
  • Structure Factors (2021 Kb)
  • Retrieve 2VE9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VE9 from S2C, [Save to disk]
  • Re-refined 2ve9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2VE9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2VE9
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2VE9, from MSDmotif at EBI
  • Fold representative 2ve9 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ve9_F] [2ve9_J] [2ve9_D] [2ve9_K] [2ve9_E] [2ve9_A] [2ve9_C] [2ve9_L] [2ve9_I] [2ve9_B] [2ve9]
  • SWISS-PROT database: [Q9I0M3]
  • Domain organization of [FTSK_PSEAE] by SWISSPFAM
  • Domain found in 2VE9: [Ftsk_gamma ] by SMART
  • Other resources with information on 2VE9
  • Community annotation for 2VE9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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