2VES	Hydrolase	date	Oct 26, 2007
title	Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Comple The Potent Bb-78485 Inhibitor
authors	I.Mochalkin, J.D.Knafels
compound		source
Molecule: Udp-3-O-Acyl-N-Acetylglucosamine Deacetylase Chain: A, B, C Fragment: Residues 1-299 Synonym: Udp-3-O-Acyl-Glcnac Deacetylase,Udp-3-O-[R-3- Hydroxymyristoyl]-N-Acetylglucosamine Deacetylase; Ec: 3.5.1.108 Engineered: Yes Mutation: Yes		Organism_scientific: Pseudomonas Aeruginosa Organism_taxid: 208964 Strain: 287 Gene: Lpxc, Enva, Pa4406 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.177 R_Free 0.221
crystal cell	length a length b length c angle alpha angle beta angle gamma 90.542 103.331 105.284 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	GVR, SO4, ZN	enzyme	Hydrolase E.C.3.5.1.108 BRENDA
Gene Ontology	Chain Function Process Component A, C, B
Primary reference	Crystal structure of LpxC from Pseudomonas aeruginosa complexed with the potent BB-78485 inhibitor., Mochalkin I, Knafels JD, Lightle S, Protein Sci. 2008 Mar;17(3):450-7. PMID:18287278

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (169 Kb) [Save to disk] Biological Unit Coordinates (2ves.pdb1.gz) 162 Kb LPC: Ligand-Protein Contacts for 2VES CSU: Contacts of Structural Units for 2VES Likely Quarternary Molecular Structure file(s) for 2VES Structure Factors (1063 Kb) Retrieve 2VES in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2VES from S2C, [Save to disk] Re-refined 2ves structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2VES in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2VES

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2VES, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ves_B] [2ves] [2ves_C] [2ves_A] SWISS-PROT database: [P47205] Domain organization of [LPXC_PSEAE] by SWISSPFAM

Other resources with information on 2VES

Community annotation for 2VES at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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