2VI6 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A, E, B, C, F, G, H, D


Primary referenceCrystal Structure and DNA Binding of the Homeodomain of the Stem Cell Transcription Factor Nanog., Jauch R, Ng CK, Saikatendu KS, Stevens RC, Kolatkar PR, J Mol Biol. 2007 Dec 4;. PMID:18177668
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk]
  • Biological Unit Coordinates (2vi6.pdb1.gz) 11 Kb
  • Biological Unit Coordinates (2vi6.pdb2.gz) 11 Kb
  • Biological Unit Coordinates (2vi6.pdb3.gz) 11 Kb
  • Biological Unit Coordinates (2vi6.pdb4.gz) 11 Kb
  • Biological Unit Coordinates (2vi6.pdb5.gz) 11 Kb
  • Biological Unit Coordinates (2vi6.pdb6.gz) 11 Kb
  • Biological Unit Coordinates (2vi6.pdb7.gz) 11 Kb
  • Biological Unit Coordinates (2vi6.pdb8.gz) 11 Kb
  • CSU: Contacts of Structural Units for 2VI6
  • Likely Quarternary Molecular Structure file(s) for 2VI6
  • Structure Factors (167 Kb)
  • Retrieve 2VI6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VI6 from S2C, [Save to disk]
  • Re-refined 2vi6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2VI6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vi6] [2vi6_A] [2vi6_B] [2vi6_C] [2vi6_D] [2vi6_E] [2vi6_F] [2vi6_G] [2vi6_H]
  • SWISS-PROT database: [Q80Z64]
  • Domain found in 2VI6: [HOX ] by SMART

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