2VM9 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, CL, MPD, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure determination of Discoidin II from Dictyostelium discoideum and carbohydrate binding properties of the lectin domain., Aragao KS, Satre M, Imberty A, Varrot A, Proteins. 2008 Oct;73(1):43-52. PMID:18384150
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (2vm9.pdb1.gz) 143 Kb
  • LPC: Ligand-Protein Contacts for 2VM9
  • CSU: Contacts of Structural Units for 2VM9
  • Likely Quarternary Molecular Structure file(s) for 2VM9
  • Structure Factors (890 Kb)
  • Retrieve 2VM9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VM9 from S2C, [Save to disk]
  • Re-refined 2vm9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2VM9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vm9] [2vm9_A]
  • SWISS-PROT database: [P42530]
  • Domain found in 2VM9: [FA58C ] by SMART

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