2VNA	Oxidoreductase	date	Feb 01, 2008
title	Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zad
authors	N.Shafqat, K.Kavanagh, A.C.W.Pike, J.R.C.Muniz, E.Pilka, A.K.Roos S.Picaud, C.Johansson, C.Smee, O.Fedorov, G.Kochan, A.Edwards, C.H.Arrowsmith, J.Weigelt, C.Bountra, F.Von Delft, U.Opperman
compound		source
Molecule: Prostaglandin Reductase 2 Chain: A Fragment: Catalytic Domain, Residues 1-349 Synonym: 15-Oxoprostaglandin 13-Reductase, Zinc-Binding Alc Dehydrogenase Domain-Containing Protein 1, Prg-2, Zinc-Bind Alcohol Dehydrogenase; Ec: 1.3.1.48 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_cell_line: R3-Prare2 Expression_system_vector: Cnic-Cthf Other_details: Cdna From Origene
symmetry	Space Group: C 1 2 1	R_factor 0.189 R_Free 0.226
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.335 83.505 72.585 90.00 108.43 90.00
method	X-Ray Diffraction	resolution	2.17 Å
ligand	NAP	enzyme	Oxidoreductase E.C.1.3.1.48 BRENDA
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk] Biological Unit Coordinates (2vna.pdb1.gz) 112 Kb LPC: Ligand-Protein Contacts for 2VNA CSU: Contacts of Structural Units for 2VNA Likely Quarternary Molecular Structure file(s) for 2VNA Structure Factors (158 Kb) Retrieve 2VNA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2VNA from S2C, [Save to disk] Re-refined 2vna structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2VNA in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2VNA

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2VNA, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2vna] [2vna_A] SWISS-PROT database: [Q8N8N7] Domain organization of [PTGR2_HUMAN] by SWISSPFAM

Other resources with information on 2VNA

Community annotation for 2VNA at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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