2VTG Metal Binding Protein date May 15, 2008
title Crystal Structure Of Human Iba2, Trigonal Crystal Form
authors J.O.Schulze, C.Quedenau, Y.Roske, A.Turnbull, U.Mueller, U.Heinem K.Buessow
compound source
Molecule: Ionized Calcium-Binding Adapter Molecule 2
Chain: A
Synonym: Ionized Calcium Adapter Moldecule 2
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Scs1
symmetry Space Group: P 32 2 1
R_factor 0.204 R_Free 0.232
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.530 70.530 95.190 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.45 Å
ligand ACT, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and functional characterization of human Iba proteins., Schulze JO, Quedenau C, Roske Y, Adam T, Schuler H, Behlke J, Turnbull AP, Sievert V, Scheich C, Mueller U, Heinemann U, Bussow K, FEBS J. 2008 Sep;275(18):4627-40. Epub 2008 Aug 11. PMID:18699778
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (2vtg.pdb1.gz) 20 Kb
  • LPC: Ligand-Protein Contacts for 2VTG
  • CSU: Contacts of Structural Units for 2VTG
  • Likely Quarternary Molecular Structure file(s) for 2VTG
  • Structure Factors (161 Kb)
  • Retrieve 2VTG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VTG from S2C, [Save to disk]
  • Re-refined 2vtg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2VTG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2VTG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2VTG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vtg_A] [2vtg]
  • SWISS-PROT database: [Q9BQI0]
  • Domain organization of [AIF1L_HUMAN] by SWISSPFAM
    • Other resources with information on 2VTG
  • Community annotation for 2VTG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science