2VX3	Transferase	date	Jun 30, 2008
title	Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a
authors	A.K.Roos, M.Soundararajan, A.C.W.Pike, O.Federov, O.King, N.Burge C.Philips, P.Filippakopoulos, C.H.Arrowsmith, M.Wikstrom, A.Edw F.Von Delft, C.Bountra, S.Knapp
compound		source
Molecule: Dual Specificity Tyrosine-Phosphorylation- Regula 1a; Chain: A, B, C, D Fragment: Residues 127-485 Synonym: Protein Kinase Minibrain Homolog, Mnbh, Hmnb, Hp86 Specificity Yak1-Related Kinase; Ec: 2.7.12.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: R3-Prare2 Expression_system_plasmid: Pnic28-Bsa4
symmetry	Space Group: C 1 2 1	R_factor 0.185 R_Free 0.230
crystal cell	length a length b length c angle alpha angle beta angle gamma 264.203 65.105 140.282 90.00 115.44 90.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	CL, D15, P6G, PTR, SO4	enzyme	Transferase E.C.2.7.12.1 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Structures of Down Syndrome Kinases, DYRKs, Reveal Mechanisms of Kinase Activation and Substrate Recognition., Soundararajan M, Roos AK, Savitsky P, Filippakopoulos P, Kettenbach AN, Olsen JV, Gerber SA, Eswaran J, Knapp S, Elkins JM, Structure. 2013 Jun 4;21(6):986-96. doi: 10.1016/j.str.2013.03.012. Epub 2013 May, 9. PMID:23665168

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (240 Kb) [Save to disk] Biological Unit Coordinates (2vx3.pdb1.gz) 63 Kb Biological Unit Coordinates (2vx3.pdb2.gz) 61 Kb Biological Unit Coordinates (2vx3.pdb3.gz) 59 Kb Biological Unit Coordinates (2vx3.pdb4.gz) 60 Kb LPC: Ligand-Protein Contacts for 2VX3 CSU: Contacts of Structural Units for 2VX3 Likely Quarternary Molecular Structure file(s) for 2VX3 Structure Factors (1177 Kb) Retrieve 2VX3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2VX3 from S2C, [Save to disk] Re-refined 2vx3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2VX3 in 3D

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Visual 3D analysis of 2VX3

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2VX3, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2vx3_C] [2vx3_D] [2vx3] [2vx3_A] [2vx3_B] SWISS-PROT database: [Q13627] Domain organization of [DYR1A_HUMAN] by SWISSPFAM Domain found in 2VX3: [S_TKc ] by SMART

Other resources with information on 2VX3

Community annotation for 2VX3 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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