2W72 DEOXYGENATED STRUCTURE OF A DISTAL SITE HEMOGLOBIN MUTANT PLUS XE date
authors Miele, A.E., Draghi, F., Sciara, G., Johnson, K.A., Renzi, F., Vallone, B., Brunori, M., Savino, C.
compound source
symmetry
R_factor
R_Free 0.153
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.07
ligand HEM, K, PO4, SO4, XE enzyme
note 2W72 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, C
  • peroxidase activity


    • D, B
  • peroxidase activity


    • Primary referencePattern of cavities in globins: The case of human hemoglobin., Savino C, Miele AE, Draghi F, Johnson KA, Sciara G, Brunori M, Vallone B, Biopolymers. 2009 Apr 13. PMID:19365817
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (257 Kb) [Save to disk]
  • Biological Unit Coordinates (2w72.pdb1.gz) 245 Kb
  • LPC: Ligand-Protein Contacts for 2W72
  • CSU: Contacts of Structural Units for 2W72
  • Likely Quarternary Molecular Structure file(s) for 2W72
  • Structure Factors (2728 Kb)
  • Retrieve 2W72 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2W72 from S2C, [Save to disk]
  • Re-refined 2w72 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2W72 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2W72
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2W72, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2w72_A] [2w72_C] [2w72] [2w72_B] [2w72_D]
  • SWISS-PROT database: [P69905] [P68871]
  • Belongs to the pore-forming globin (globin) family according to TCDB.
  • Belongs to the pore-forming globin (globin) family according to TCDB.
  • Domain organization of [HBA_HUMAN] [HBB_HUMAN] by SWISSPFAM
    • Other resources with information on 2W72
  • Community annotation for 2W72 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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