2W84 Protein Transport date Jan 09, 2009
title Structure Of Pex14 In Complex With Pex5
authors C.Neufeld, F.V.Filipp, B.Simon, A.Neuhaus, N.Schueller, C.David, H.Kooshapur, T.Madl, R.Erdmann, W.Schliebs, M.Wilmanns, M.Sattle
compound source
Molecule: Peroxisomal Membrane Protein Pex14
Chain: A
Fragment: N-Terminal Domain, Residues 16-80
Synonym: Peroxisomal Membrane Anchor Protein Pex14, Peroxin Receptor-Docking Protein, Pex14;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Petm11_mod

Molecule: Peroxisomal Targeting Signal 1 Receptor
Chain: B
Fragment: First Wxxxfy Motif, Residues 108-127
Synonym: Peroxisome Receptor 1, Peroxisomal C-Terminal Targ Signal Import Receptor, Pts1-Bp, Peroxin-5, Pts1 Receptor, Pex5;
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for competitive interactions of Pex14 with the import receptors Pex5 and Pex19., Neufeld C, Filipp FV, Simon B, Neuhaus A, Schuller N, David C, Kooshapur H, Madl T, Erdmann R, Schliebs W, Wilmanns M, Sattler M, EMBO J. 2009 Feb 5. PMID:19197237
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (201 Kb) [Save to disk]
  • Biological Unit Coordinates (2w84.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 2W84
  • Original NMR restraints for 2W84 from PDB
  • Retrieve 2W84 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2W84 from S2C, [Save to disk]
    • View 2W84 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2W84
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2W84, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2w84] [2w84_A] [2w84_B]
  • SWISS-PROT database: [O75381] [P50542]
  • Belongs to the peroxisomal protein importer (ppi) family according to TCDB.
  • Domain organization of [PEX14_HUMAN] [PEX5_HUMAN] by SWISSPFAM
    • Other resources with information on 2W84
  • Community annotation for 2W84 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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