2WB8 Transferase date Feb 23, 2009
title Crystal Structure Of Haspin Kinase
authors F.Villa, M.Tortorci, F.Forneris, A.Mattevi, A.Musacchio
compound source
Molecule: Serinethreonine-Protein Kinase Haspin
Chain: A
Fragment: Residues 452-798
Synonym: Haploid Germ Cell-Specific Nuclear Protein Kinase, H-Haspin, Germ Cell-Specific Gene 2 Protein Haspin Kinase;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
symmetry Space Group: P 21 21 21
R_factor 0.20716 R_Free 0.26733
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.935 77.710 82.386 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.15 Å
ligand
enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the catalytic domain of Haspin, an atypical kinase implicated in chromatin organization., Villa F, Capasso P, Tortorici M, Forneris F, de Marco A, Mattevi A, Musacchio A, Proc Natl Acad Sci U S A. 2009 Nov 16. PMID:19918049
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk]
  • Biological Unit Coordinates (2wb8.pdb1.gz) 60 Kb
  • CSU: Contacts of Structural Units for 2WB8
  • Structure Factors (195 Kb)
  • Retrieve 2WB8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WB8 from S2C, [Save to disk]
  • Re-refined 2wb8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WB8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WB8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WB8, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wb8_A] [2wb8]
  • SWISS-PROT database: [Q8TF76]
  • Domain organization of [HASP_HUMAN] by SWISSPFAM
  • Domains found in 2WB8: [DUF3635] [STYKc ] by SMART
  • Other resources with information on 2WB8
  • Community annotation for 2WB8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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