2WBW	Structural Protein	date	Mar 05, 2009
title	Ad37 Fibre Head In Complex With Car D1 And Sialic Acid
authors	E.Seiradake, D.Henaff, H.Wodrich, O.Billet, M.Perreau, C.Hippert, F.Mennechet, G.Schoehn, H.Lortat-Jacob, H.Dreja, S.Ibanes, V.Kal J.P.Wang, R.W.Finberg, S.Cusack, E.J.Kremer
compound		source
Molecule: Fiber Protein Chain: A Fragment: Fibre Head, Residues 22-210 Synonym: Human Adenovirus Type 37 Fibre Head Engineered: Yes		Organism_scientific: Human Adenovirus 37 Organism_taxid: 52275 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21 Star
Molecule: Coxsackievirus And Adenovirus Receptor Chain: B Fragment: D1, Residues 15-140 Synonym: Coxsackievirus B-Adenovirus Receptor, Hcvadr, Cvb3 Protein, Hcar; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Xl1 Blue
symmetry	Space Group: I 2 3	R_factor 0.171 R_Free 0.176
crystal cell	length a length b length c angle alpha angle beta angle gamma 132.010 132.010 132.010 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.55 Å
ligand	CA, SIA	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	The cell adhesion molecule "CAR" and sialic acid on human erythrocytes influence adenovirus in vivo biodistribution., Seiradake E, Henaff D, Wodrich H, Billet O, Perreau M, Hippert C, Mennechet F, Schoehn G, Lortat-Jacob H, Dreja H, Ibanes S, Kalatzis V, Wang JP, Finberg RW, Cusack S, Kremer EJ, PLoS Pathog. 2009 Jan;5(1):e1000277. Epub 2009 Jan 2. PMID:19119424

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk] Biological Unit Coordinates (2wbw.pdb1.gz) 57 Kb LPC: Ligand-Protein Contacts for 2WBW CSU: Contacts of Structural Units for 2WBW Likely Quarternary Molecular Structure file(s) for 2WBW Structure Factors (434 Kb) Retrieve 2WBW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2WBW from S2C, [Save to disk] Re-refined 2wbw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2WBW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2WBW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2WBW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2wbw] [2wbw_A] [2wbw_B] SWISS-PROT database: [P78310] [Q80S15] Domain organization of [CXAR_HUMAN] [Q80S15_9ADEN] by SWISSPFAM Domain found in 2WBW: [IG ] by SMART

Other resources with information on 2WBW

Community annotation for 2WBW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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